STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PUF4Putative RNA binding protein. (433 aa)    
Predicted Functional Partners:
ZOSMA_76G00230
Histone deacetylase complex subunit SAP18.
    
 0.910
ZOSMA_6G01060
U1 small nuclear ribonucleoprotein 70 kDa.
    
 0.690
A0A0K9P9P8
Uncharacterized protein.
   
 0.633
A0A0K9P9Q2
Splicing factor 3B subunit.
   
 0.633
A0A0K9PNG6
Arginine/serine-rich-splicing factor RSP40.
    
0.606
A0A0K9PW51
Serine/arginine-rich splicing factor RS2Z32.
    
 0.592
A0A0K9PLC7
Putative Arginine/serine-rich splicing factor.
    
 0.591
ZOSMA_97G00160
Arginine/serine-rich splicing factor.
    
 0.566
ZOSMA_75G00670
RRM domain-containing protein.
   
0.552
ZOSMA_56G01020
Putative Arginine/serine-rich splicing factor.
    
 0.549
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.