STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PVJ3Protein decapping 5. (636 aa)    
Predicted Functional Partners:
ZOSMA_43G00110
Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
 
 0.911
ZOSMA_25G00250
DEAD-box ATP-dependent RNA helicase 8.
   
 
 0.911
A0A0K9PSK8
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
    
 
 0.858
ZOSMA_39G00190
mRNA decapping enzyme 2.
    
 
 0.822
ZOSMA_39G00180
mRNA decapping enzyme 2.
    
 
 0.822
A0A0K9Q539
Uncharacterized protein.
    
 
 0.822
ZOSMA_3G00500
mRNA-decapping enzyme-like protein.
    
 
 0.816
A0A0K9PBQ7
Uncharacterized protein.
    
 
 0.816
A0A0K9PC18
Uncharacterized protein.
    
 
 0.816
ZOSMA_74G00510
Chromodomain-helicase-DNA-binding protein.
   
 
 0.747
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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