A0A0K9PW47 protein (Zostera marina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0K9PW47

Amidohydro-rel domain-containing protein. (391 aa)

Predicted Functional Partners:

A0A0K9PAQ8

0.924

A0A0K9PVV7

0.924

ZOSMA_42G01010

0.840

ZOSMA_53G00080

0.826

A0A0K9PQZ1

0.820

A0A0K9PYZ4

0.801

A0A0K9Q0G1

0.801

ZOSMA_84G00350

0.795

A0A0K9PX00

0.790

ZOSMA_95G00280

0.789

Your Current Organism:

Zostera marina

NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0K9PAQ8	A0A0K9PQZ1	A0A0K9PAQ8	A0A0K9PQZ1	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Carbamoyl-phosphate synthase (Glutamine-hydrolyzing).	0.843
A0A0K9PAQ8	A0A0K9PVV7	A0A0K9PAQ8	A0A0K9PVV7	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	0.999
A0A0K9PAQ8	A0A0K9PW47	A0A0K9PAQ8	A0A0K9PW47	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Amidohydro-rel domain-containing protein.	0.924
A0A0K9PAQ8	A0A0K9PX00	A0A0K9PAQ8	A0A0K9PX00	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.948
A0A0K9PAQ8	A0A0K9Q0G1	A0A0K9PAQ8	A0A0K9Q0G1	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Alanine aminotransferase.	0.513
A0A0K9PAQ8	ZOSMA_42G01010	A0A0K9PAQ8	A0A0K9P4A6	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.	0.569
A0A0K9PAQ8	ZOSMA_84G00350	A0A0K9PAQ8	A0A0K9NNG8	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.793
A0A0K9PAQ8	ZOSMA_95G00280	A0A0K9PAQ8	A0A0K9NI46	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Putative aldehyde dehydrogenase.	0.971
A0A0K9PQZ1	A0A0K9PAQ8	A0A0K9PQZ1	A0A0K9PAQ8	Carbamoyl-phosphate synthase (Glutamine-hydrolyzing).	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	0.843
A0A0K9PQZ1	A0A0K9PVV7	A0A0K9PQZ1	A0A0K9PVV7	Carbamoyl-phosphate synthase (Glutamine-hydrolyzing).	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	0.843
A0A0K9PQZ1	A0A0K9PW47	A0A0K9PQZ1	A0A0K9PW47	Carbamoyl-phosphate synthase (Glutamine-hydrolyzing).	Amidohydro-rel domain-containing protein.	0.820
A0A0K9PQZ1	A0A0K9Q0G1	A0A0K9PQZ1	A0A0K9Q0G1	Carbamoyl-phosphate synthase (Glutamine-hydrolyzing).	Alanine aminotransferase.	0.674
A0A0K9PQZ1	ZOSMA_42G01010	A0A0K9PQZ1	A0A0K9P4A6	Carbamoyl-phosphate synthase (Glutamine-hydrolyzing).	Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.	0.971
A0A0K9PQZ1	ZOSMA_53G00080	A0A0K9PQZ1	A0A0K9NX35	Carbamoyl-phosphate synthase (Glutamine-hydrolyzing).	Ferredoxin--nitrite reductase, chloroplastic.	0.654
A0A0K9PQZ1	ZOSMA_84G00350	A0A0K9PQZ1	A0A0K9NNG8	Carbamoyl-phosphate synthase (Glutamine-hydrolyzing).	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.935
A0A0K9PVV7	A0A0K9PAQ8	A0A0K9PVV7	A0A0K9PAQ8	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	0.999
A0A0K9PVV7	A0A0K9PQZ1	A0A0K9PVV7	A0A0K9PQZ1	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Carbamoyl-phosphate synthase (Glutamine-hydrolyzing).	0.843
A0A0K9PVV7	A0A0K9PW47	A0A0K9PVV7	A0A0K9PW47	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Amidohydro-rel domain-containing protein.	0.924
A0A0K9PVV7	A0A0K9PX00	A0A0K9PVV7	A0A0K9PX00	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.948
A0A0K9PVV7	A0A0K9Q0G1	A0A0K9PVV7	A0A0K9Q0G1	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Alanine aminotransferase.	0.513