STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PW59Uncharacterized protein. (79 aa)    
Predicted Functional Partners:
A0A0K9PIX9
AAR2 protein family.
    
 
 0.895
ZOSMA_50G01040
Putative Pre-mRNA-processing-splicing factor.
    
 
 0.831
A0A0K9PI80
Chaperone protein dnaJ.
   
 
 0.766
A0A0K9PSF6
Pre-mRNA splicing helicase.
   
 
 0.766
A0A0K9PU09
Chaperone protein dnaJ.
   
 
 0.766
A0A0K9P374
Elongation factor like protein.
   
 
 0.762
A0A0K9Q1T1
E2F-associated phosphoprotein.
    
   0.749
A0A0K9P8J4
HIT zinc finger family protein, expressed.
    
 
 0.720
A0A0K9PM08
Helicase C-terminal domain-containing protein.
   
 
 0.534
A0A0K9PNS5
Activating signal cointegrator 1 complex subunit.
   
 
 0.534
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.