STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PWP1Putative calcium-binding protein CML13. (155 aa)    
Predicted Functional Partners:
ZOSMA_38G00270
Uncharacterized protein.
    
 0.935
ZOSMA_10G01240
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.906
ZOSMA_42G00760
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
   
 
 0.853
A0A0K9PLI8
PCI domain-containing protein.
    
 
 0.817
ZOSMA_1G01790
Putative PCI domain-containing protein.
    
 
 0.801
ZOSMA_20G01420
SAC3/GANP family protein.
    
 
 0.795
A0A0K9PBS5
Rad23 UV excision repair protein family.
   
 0.770
ZOSMA_56G00090
Putative DNA damage-binding protein.
   
 0.750
A0A0K9Q0P1
Ubiquitin receptor RAD23c.
   
 0.749
ZOSMA_6G00390
4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase.
   
 
 0.736
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.