STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PXE3Vacuolar sorting receptor 4. (638 aa)    
Predicted Functional Partners:
A0A0K9Q0G5
Endonuclease/exonuclease/phosphatase family protein.
    
 0.820
ZOSMA_89G01250
Putative WD-repeat protein.
    
  0.562
A0A0K9PAB7
Putative WD-repeat protein.
    
  0.562
ZOSMA_15G01470
Root cap domain-containing protein.
    
  0.562
ZOSMA_69G00420
Vacuolar sorting receptor 6.
  
  
 
0.550
A0A0K9P0N0
Vacuolar sorting receptor 6.
  
  
 
0.550
ZOSMA_56G01180
Putative Vacuolar sorting receptor 1.
  
  
 
0.547
A0A0K9PXP9
Putative Vacuolar sorting receptor 1.
  
  
 
0.547
ZOSMA_6G00850
Vacuolar-sorting receptor 3.
  
  
 
0.545
ZOSMA_81G00440
RING-type domain-containing protein.
     
  0.540
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.