STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PXG0TPX2_importin domain-containing protein. (284 aa)    
Predicted Functional Partners:
A0A0K9PV71
YTH domain containing 2.
   
 0.999
ZOSMA_37G01000
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.985
A0A0K9NWS0
Putative WD-repeat protein.
    
 0.983
A0A0K9PWY1
RNA polymerase II subunit a c-terminal domain phosphatase ssu72.
    
 0.983
A0A0K9PV59
Fip1 domain-containing protein.
   
 0.982
ZOSMA_44G00400
mRNA 3'-end-processing protein rna14.
   
 0.970
ZOSMA_37G01340
RNA-binding protein.
   
 0.959
A0A0K9PHC6
Uncharacterized protein.
   
 0.957
A0A0K9PJX0
Uncharacterized protein.
    
 0.956
A0A0K9PRW5
Putative Retinoblastoma-binding protein.
    
 0.956
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.