STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PXJ8Leucine rich repeat protein. (351 aa)    
Predicted Functional Partners:
A0A0K9Q5G4
Uncharacterized protein.
  
 
   0.583
A0A0K9P4E7
Uncharacterized protein.
  
 
  0.582
ZOSMA_95G00110
Leucine-rich repeat extensin-like protein 6.
  
 
  0.562
A0A0K9PY82
Malectin domain-containing protein.
  
 
  0.542
A0A0K9Q1S7
Putative Kinase.
  
 
  0.537
A0A0K9Q2B8
Protein kinase.
  
 
   0.522
A0A0K9PTR8
Leucine-rich repeat receptor-like protein kinase family.
  
 
  0.521
ZOSMA_62G00050
E3 ubiquitin-protein ligase KEG.
    
 0.519
A0A0K9PK08
Uncharacterized protein.
  
     0.518
A0A0K9Q218
Small nuclear ribonucleoprotein-associated protein.
    
 0.509
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.