STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PXT0Nucleic acid-binding, OB-fold-like protein. (136 aa)    
Predicted Functional Partners:
ZOSMA_87G00310
Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses.
    
  0.853
ZOSMA_76G00680
Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses.
    
  0.853
A0A0K9PNM7
Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses.
    
  0.853
ZOSMA_33G01100
Nucleic acid-binding, OB-fold-like protein.
  
  
 
0.840
ZOSMA_26G01360
NAC domain-containing protein.
    
 0.838
ZOSMA_58G00210
Putative Replication protein A 30 kDa subunit.
    
  0.803
ZOSMA_36G00380
Putative Replication protein A 30 kDa subunit.
    
  0.803
ZOSMA_5G02840
Uncharacterized protein.
   
  0.588
ZOSMA_62G00050
E3 ubiquitin-protein ligase KEG.
   
  0.533
ZOSMA_25G00880
Glutamyl-tRNA(Gln) amidotransferase subunit A.
    
  0.522
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.