STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_13G01040Acetyltransf_13 domain-containing protein. (132 aa)    
Predicted Functional Partners:
ZOSMA_70G00200
Structural maintenance of chromosomes protein.
   
 0.987
A0A0K9PT12
Structural maintenance of chromosomes protein.
   
 0.935
A0A0K9P2B6
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.934
A0A0K9P5H1
SMC_N domain-containing protein.
   
 0.934
ZOSMA_4G00030
DUF641 domain-containing protein.
   
 0.927
A0A0K9PNI9
Structural maintenance of chromosomes protein.
   
 0.927
A0A0K9PGZ1
Structural maintenance of chromosomes protein 5.
   
 0.919
ZOSMA_46G00280
AAA_23 domain-containing protein.
   
 0.897
ZOSMA_46G00270
Structural maintenance of chromosomes protein 6A.
   
 0.897
A0A0K9PTY7
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.897
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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