STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PY24Carboxypeptidase; Belongs to the peptidase S10 family. (487 aa)    
Predicted Functional Partners:
A0A0K9PZF9
RING-type E3 ubiquitin transferase.
      
 0.472
A0A0K9PBK2
Protein kinase; Belongs to the protein kinase superfamily.
      
 0.465
A0A0K9PJY2
Pectin beta-glucuronyltransferase, family GT47; Belongs to the glycosyltransferase 47 family.
      
 0.449
ZOSMA_29G00880
UDP-beta-L-Ara: arabinan alpha-1,5-L-arabinosyltransferase, family GT47; Belongs to the glycosyltransferase 47 family.
      
 0.430
ZOSMA_89G01320
Uncharacterized protein.
      
 0.426
A0A0K9P963
DDB1-and CUL4-associated factor.
      
 0.426
A0A0K9PH15
Thioredoxin domain-containing protein.
      
 0.426
A0A0K9Q0L0
Putative Pentatricopeptide repeat-containing protein.
      
 0.426
A0A0K9Q571
DDB1-and CUL4-associated factor.
      
 0.426
ZOSMA_37G00660
RING-type E3 ubiquitin transferase.
      
 0.424
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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