STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_14G00050Elongation factor 1-gamma 2. (411 aa)    
Predicted Functional Partners:
ZOSMA_80G00560
Methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.927
ZOSMA_22G00630
Methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.927
ZOSMA_24G01050
Elongation factor 1-beta 1.
  
 0.893
ZOSMA_10G01390
Elongation factor 1-delta; Belongs to the EF-1-beta/EF-1-delta family.
  
 0.889
A0A0K9PJE2
Homogentisate 1,2-dioxygenase.
  
 
 0.766
A0A0K9PK04
Glutathione S-transferase; Belongs to the GST superfamily.
  
 
 0.700
ZOSMA_49G00400
Putative Fumarylacetoacetate hydrolase.
  
 
 0.694
ZOSMA_31G00790
Fumarylacetoacetase.
  
 
 0.694
A0A0K9P928
Uncharacterized protein.
  
 
 0.694
ZOSMA_1G00370
Uncharacterized protein.
  
 
 0.694
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.