STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9PYG8Response regulatory domain-containing protein. (432 aa)    
Predicted Functional Partners:
ZOSMA_5G01880
Histidine-containing phosphotransfer protein 4.
    
 0.588
A0A0K9PJG0
Histidine-containing phosphotransfer protein 4.
    
 0.588
ZOSMA_8G00330
HPt domain-containing protein.
    
  0.583
ZOSMA_39G00290
Histidine-containing phosphotransfer protein 5.
    
  0.583
A0A0K9PTP4
Histidine-containing phosphotransfer protein 5.
    
  0.469
A0A0K9PRV1
TATA-box binding protein.
   
 0.451
A0A0K9PYR3
Histone-lysine N-methyltransferase.
    
  0.438
ZOSMA_4G02000
Two-component response regulator; Transcriptional activator that binds specific DNA sequence.
  
  
 
0.425
ZOSMA_65G00390
Gigantea.
    
 0.406
A0A0K9P5T0
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
    
  0.405
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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