STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_14G01420Uncharacterized protein. (185 aa)    
Predicted Functional Partners:
A0A0K9PQC5
Putative U3 small nucleolar RNA-associated protein.
   
 0.779
ZOSMA_34G00440
Splicing factor 3a, subunit 3.
    
 0.757
A0A0K9PRI4
Nucleolar complex protein 4.
   
  0.711
ZOSMA_79G00440
Putative Something about silencing protein sas10.
   
  0.703
ZOSMA_22G01160
Uncharacterized protein.
   
  0.690
ZOSMA_46G00340
Putative Pre-mRNA-splicing factor syf2.
    
 0.674
A0A0K9PU07
Uncharacterized protein.
 
  
  0.674
A0A0K9Q4D6
Nucleolar protein.
   
  0.672
ZOSMA_40G00710
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
    
  0.667
ZOSMA_35G00840
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
    
  0.667
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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