STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9Q087Serine--tRNA ligase. (514 aa)    
Predicted Functional Partners:
ZOSMA_3G00570
Uncharacterized protein.
     
 0.855
A0A0K9Q4K6
Uncharacterized protein.
  
  
 
0.853
A0A0K9PWZ2
Serine--tRNA ligase.
  
  
 
0.851
A0A0K9P878
Glycine--tRNA ligase.
   
  
 0.847
A0A0K9PCX4
Phenylalanine--tRNA ligase.
  
 
 0.798
ZOSMA_27G01140
SAGA-associated factor 11.
    
 
 0.793
ZOSMA_54G00070
Phenylalanine--tRNA ligase.
  
 
 0.786
ZOSMA_2G02730
Uncharacterized protein.
  
 
 0.784
ZOSMA_46G00090
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
   0.780
A0A0K9P334
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.768
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.