STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9Q1L7Protein HEADING DATE 3A. (194 aa)    
Predicted Functional Partners:
A0A0K9PGS2
Uncharacterized protein.
    
   0.929
A0A0K9Q5C4
50S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family.
   
 0.843
A0A0K9P1W0
Mitochondrial 28S ribosomal protein S29-like protein.
   
 
 0.830
ZOSMA_42G00260
Uncharacterized protein.
   
 
 0.817
ZOSMA_41G00510
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.806
A0A0K9Q337
MRP-S28 domain-containing protein.
   
   0.801
ZOSMA_53G00490
30S ribosomal protein S18 family; Belongs to the bacterial ribosomal protein bS18 family.
   
   0.795
ZOSMA_22G00510
Trigger_N domain-containing protein.
   
   0.792
ZOSMA_60G00320
Mitochondrial ribosomal protein L43.
   
 
 0.786
A0A0K9PP07
50S ribosomal protein L23.
   
 
 0.785
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.