STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9Q2Q4Pre-mRNA-processing protein. (604 aa)    
Predicted Functional Partners:
A0A0K9PCJ2
Pre-mRNA-splicing factor CLF1.
  
 0.993
A0A0K9P9Q1
Pre-mRNA-splicing factor SYF1.
   
 0.990
A0A0K9PUF6
Pre-mRNA splicing factor.
  
 
 0.980
ZOSMA_23G00970
Intron-binding protein aquarius.
    
  0.978
ZOSMA_5G01670
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.977
ZOSMA_46G00340
Putative Pre-mRNA-splicing factor syf2.
   
 
 0.966
A0A0K9PFA4
Pre-mRNA splicing factor prp46.
   
 
 0.966
ZOSMA_50G01040
Putative Pre-mRNA-processing-splicing factor.
   
 
 0.962
A0A0K9P374
Elongation factor like protein.
    
 
 0.962
ZOSMA_37G01140
Pre-mRNA-splicing factor SLT11.
   
 0.961
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.