STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9Q2W2Single-stranded DNA-binding protein. (289 aa)    
Predicted Functional Partners:
ZOSMA_13G00550
Ribosomal protein S6 family protein.
  
  
 0.937
rps7
Ribosomal protein S7, mitochondrial.
  
   0.795
ZOSMA_34G01030
Ribosomal protein 5B; Belongs to the universal ribosomal protein uS7 family.
  
   0.795
ZOSMA_39G00280
30S ribosomal protein S10.
   
 
 0.779
ZOSMA_30G00860
30S ribosomal protein S10.
   
 
 0.779
ZOSMA_1G03910
30S ribosomal protein S10-like.
   
 
 0.779
ZOSMA_65G00300
Putative 50S ribosomal protein L21.
   
    0.767
A0A0K9NYC8
50S ribosomal protein L21.
   
    0.767
ZOSMA_98G00360
Translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
   
  
 0.695
ZOSMA_98G00380
Translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
   
  
 0.695
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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