STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9Q3Z0WUSCHEL-related homeobox. (459 aa)    
Predicted Functional Partners:
ZOSMA_62G00050
E3 ubiquitin-protein ligase KEG.
  
 0.947
ZOSMA_10G01240
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.903
ZOSMA_3G00650
Phosphatidylinositol 4-kinase beta 1; Belongs to the PI3/PI4-kinase family.
    
 0.799
A0A0K9PCA9
E3 ubiquitin-protein ligase PRT1.
    
  0.689
A0A0K9Q320
Exocyst complex component SEC8.
    
 0.673
ZOSMA_25G01180
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.667
A0A0K9P2E1
zf-LSD1 domain-containing protein.
   
 0.637
ZOSMA_15G01430
Rab proteins geranylgeranyltransferase component A.
    
 0.632
ZOSMA_78G00120
Tetratricopeptide repeat protein 2-like.
  
 0.623
ZOSMA_5G02840
Uncharacterized protein.
   
 0.620
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.