STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9Q431Bax inhibitor 1; Belongs to the BI1 family. (246 aa)    
Predicted Functional Partners:
ZOSMA_74G00250
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 
 0.834
ZOSMA_50G00620
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 
 0.834
ZOSMA_2G00910
Prohibitin.
    
 
 0.530
ZOSMA_88G00570
Putative Programmed cell death protein, putative (Dna-binding apoptosis-relatedprotein, putative).
   
  
 0.516
A0A0K9PVK6
Acetylornithine aminotransferase, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
  
 0.486
ZOSMA_34G01290
DNA ligase.
      
 0.478
A0A0K9PK49
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.
   
  
 0.478
ZOSMA_1G01530
UDP-glucose:glycoprotein glucosyltransferase, family GT24.
      
 0.478
ZOSMA_8G00140
Cytochrome b5, seed isoform; Belongs to the cytochrome b5 family.
   
 
 0.475
A0A0K9PTM4
Beclin 1 protein.
      
 0.471
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.