STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9Q4H0Uncharacterized protein. (113 aa)    
Predicted Functional Partners:
ZOSMA_2G00770
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.586
A0A0K9PTH0
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.586
ZOSMA_59G00350
DNA cross-link repair 1A protein.
   
 0.577
A0A0K9PTP7
NPL4-like protein.
   
 
  0.576
ZOSMA_68G00660
Uncharacterized protein.
    
  0.474
ZOSMA_66G00150
DEAD-box ATP-dependent RNA helicase 2.
    
  0.474
ZOSMA_62G00010
Uncharacterized protein.
    
  0.474
A0A0K9Q248
DEAD-box ATP-dependent RNA helicase 34.
    
  0.474
ZOSMA_64G00090
Uncharacterized protein.
    
  0.469
ZOSMA_64G00080
Uncharacterized protein.
    
  0.469
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.