STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9Q4W9Ribosome biogenesis protein BMS1-like protein. (1165 aa)    
Predicted Functional Partners:
ZOSMA_74G01030
Putative WD-repeat protein.
   
 0.998
ZOSMA_22G01160
Uncharacterized protein.
   
 0.998
A0A0K9PUI7
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
  
 0.998
A0A0K9Q4D6
Nucleolar protein.
   
 0.998
ZOSMA_72G00110
Transducin/WD40 repeat-like superfamily protein.
   
 0.997
ZOSMA_30G01140
WD repeat-containing protein.
   
 0.997
ZOSMA_15G00320
Periodic tryptophan protein 2.
   
 0.997
A0A0K9Q208
Putative WD-repeat protein.
   
 0.997
ZOSMA_27G00810
U3 small nucleolar RNA-associated protein-like protein.
   
 0.996
ZOSMA_20G00760
RRP7 domain-containing protein.
   
 0.996
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.