STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9Q5E4Uncharacterized protein. (284 aa)    
Predicted Functional Partners:
A0A0K9PF82
Uncharacterized protein.
 
    
0.917
A0A0K9P4E7
Uncharacterized protein.
  
 
  0.587
ZOSMA_95G00110
Leucine-rich repeat extensin-like protein 6.
  
 
  0.573
A0A0K9PY82
Malectin domain-containing protein.
  
 
  0.562
A0A0K9PK08
Uncharacterized protein.
  
 
   0.561
A0A0K9PTR8
Leucine-rich repeat receptor-like protein kinase family.
  
 
  0.539
A0A0K9Q2B8
Protein kinase.
  
 
   0.538
ZOSMA_83G00350
LRRNT_2 domain-containing protein.
  
 
   0.526
ZOSMA_17G00460
Leucine-rich repeat receptor-like protein kinase family.
  
 
   0.520
ZOSMA_54G00650
Leucine-rich repeat receptor-like protein kinase family.
  
 
  0.514
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.