STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9Q5Z8Uncharacterized protein. (385 aa)    
Predicted Functional Partners:
A0A0K9PU07
Uncharacterized protein.
 
     0.951
A0A0K9P7Q9
Uncharacterized protein.
 
   
  0.936
A0A0K9PG58
DRBM domain-containing protein.
 
   
  0.920
ZOSMA_34G00440
Splicing factor 3a, subunit 3.
    
 0.795
A0A0K9PQC5
Putative U3 small nucleolar RNA-associated protein.
   
 0.779
A0A0K9PZ40
Putative ATP-dependent RNA helicase.
  
  
 
0.712
A0A0K9PRI4
Nucleolar complex protein 4.
   
  0.711
ZOSMA_79G00440
Putative Something about silencing protein sas10.
   
  0.703
A0A0K9PNB7
Putative ATP-dependent RNA helicase.
  
  
 
0.696
ZOSMA_22G01160
Uncharacterized protein.
 
 
  0.690
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.