STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0K9Q664Polyketide cyclase/dehydrase and lipid transport-like protein. (449 aa)    
Predicted Functional Partners:
ZOSMA_64G00560
BHLH domain-containing protein.
      
 0.430
ZOSMA_18G00430
BHLH domain-containing protein.
      
 0.430
A0A0K9Q2R8
BHLH domain-containing protein.
      
 0.430
ZOSMA_9G01620
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.426
ZOSMA_21G00930
1-acyl-sn-glycerol-3-phosphate acyltransferase.
   
 
  0.422
A0A0K9PU28
FLZ-type domain-containing protein.
      
 0.416
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.