STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICPUN_56114Folate-biopterin transporter family. (541 aa)    
Predicted Functional Partners:
DHFR-TS
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
 
 0.624
MICPUN_64424
AA_kinase domain-containing protein.
  
 
 0.604
atpF
ATP synthase subunit b, chloroplastic; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0).
   
 
 0.596
SEC61a
Type II secretory pathway family; Belongs to the SecY/SEC61-alpha family.
  
  
 0.583
MICPUN_89585
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
  
 0.583
MICPUN_87614
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
 0.582
MICPUN_91459
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
  
  
 0.582
ATPC
H+-or Na+-translocating f-type, v-type and A-type ATPase superfamily.
   
 
 0.580
MICPUN_89673
ATP synthase subunit gamma.
   
 
 0.580
MICPUN_108173
Ribosomal_L18_c domain-containing protein.
  
  
 0.578
Your Current Organism:
Micromonas commoda
NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299
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