Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MICPUN_55769 | MICPUN_56496 | C1DZ00 | C1DZL6 | General transcription factor IIH subunit. | Helicase ATP-binding domain-containing protein. | 0.994 |
MICPUN_55769 | MICPUN_60272 | C1DZ00 | C1EB17 | General transcription factor IIH subunit. | Uncharacterized protein. | 0.991 |
MICPUN_55769 | MICPUN_60505 | C1DZ00 | C1FFG3 | General transcription factor IIH subunit. | BSD domain-containing protein. | 0.996 |
MICPUN_55769 | MICPUN_61733 | C1DZ00 | C1FI28 | General transcription factor IIH subunit. | Transcription initiation factor IIE, alpha subunit. | 0.991 |
MICPUN_55769 | MICPUN_63142 | C1DZ00 | C1FJ22 | General transcription factor IIH subunit. | MAT1 domain-containing protein. | 0.996 |
MICPUN_55769 | MICPUN_63685 | C1DZ00 | C1EF71 | General transcription factor IIH subunit. | F-box domain-containing protein. | 0.905 |
MICPUN_55769 | MICPUN_64801 | C1DZ00 | C1EJ45 | General transcription factor IIH subunit. | CYCLIN domain-containing protein; Belongs to the cyclin family. | 0.983 |
MICPUN_55769 | MICPUN_68288 | C1DZ00 | C1E9T2 | General transcription factor IIH subunit. | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.996 |
MICPUN_55769 | MICPUN_77343 | C1DZ00 | C1FEI3 | General transcription factor IIH subunit. | Uncharacterized protein. | 0.994 |
MICPUN_55769 | TFB4 | C1DZ00 | C1FDB0 | General transcription factor IIH subunit. | RNA polymerase II transcription factor B subunit 4. | 0.996 |
MICPUN_56496 | MICPUN_55769 | C1DZL6 | C1DZ00 | Helicase ATP-binding domain-containing protein. | General transcription factor IIH subunit. | 0.994 |
MICPUN_56496 | MICPUN_60272 | C1DZL6 | C1EB17 | Helicase ATP-binding domain-containing protein. | Uncharacterized protein. | 0.990 |
MICPUN_56496 | MICPUN_60505 | C1DZL6 | C1FFG3 | Helicase ATP-binding domain-containing protein. | BSD domain-containing protein. | 0.994 |
MICPUN_56496 | MICPUN_61733 | C1DZL6 | C1FI28 | Helicase ATP-binding domain-containing protein. | Transcription initiation factor IIE, alpha subunit. | 0.990 |
MICPUN_56496 | MICPUN_63142 | C1DZL6 | C1FJ22 | Helicase ATP-binding domain-containing protein. | MAT1 domain-containing protein. | 0.994 |
MICPUN_56496 | MICPUN_63685 | C1DZL6 | C1EF71 | Helicase ATP-binding domain-containing protein. | F-box domain-containing protein. | 0.976 |
MICPUN_56496 | MICPUN_64801 | C1DZL6 | C1EJ45 | Helicase ATP-binding domain-containing protein. | CYCLIN domain-containing protein; Belongs to the cyclin family. | 0.994 |
MICPUN_56496 | MICPUN_68288 | C1DZL6 | C1E9T2 | Helicase ATP-binding domain-containing protein. | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.994 |
MICPUN_56496 | MICPUN_77343 | C1DZL6 | C1FEI3 | Helicase ATP-binding domain-containing protein. | Uncharacterized protein. | 0.995 |
MICPUN_56496 | TFB4 | C1DZL6 | C1FDB0 | Helicase ATP-binding domain-containing protein. | RNA polymerase II transcription factor B subunit 4. | 0.994 |
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