STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICPUN_56673Kinase/lysine decarboxylase. (610 aa)    
Predicted Functional Partners:
DHFR-TS
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.698
MICPUN_62730
AP_endonuc_2 domain-containing protein.
  
 
 0.684
FBAII
Fructose-bisphosphate aldolase, class II.
  
 
 0.643
MICPUN_61267
PseudoU_synth_2 domain-containing protein.
    
 0.614
MICPUN_69678
A_deaminase domain-containing protein.
   
 0.585
MICPUN_61432
Uncharacterized protein.
  
 
 0.558
MICPUN_98107
A_deaminase domain-containing protein.
    
 0.555
PGI
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.540
MICPUN_56350
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
  
  
 0.520
MICPUN_98140
Pribosyltran domain-containing protein.
   
 
 0.498
Your Current Organism:
Micromonas commoda
NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299
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