STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HY1Heme oxygenase. (293 aa)    
Predicted Functional Partners:
HEMH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.943
FRA
Uncharacterized protein.
     
 0.917
MICPUN_68841
Uncharacterized protein.
     
 0.902
MICPUN_76264
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
     
  0.900
MICPUN_76259
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
     
  0.900
MICPUN_113405
Ferredoxin-dependent bilin reductase.
    
 0.847
GPX5
Glutathione peroxidase.
    
 
 0.764
PORA
NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.
      
 0.666
PORC
Light-dependent protochlorophyllide oxido-reductase.
      
 0.666
MICPUN_72245
Uncharacterized protein.
      
 0.656
Your Current Organism:
Micromonas commoda
NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.