STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICPUN_108312Uncharacterized protein. (162 aa)    
Predicted Functional Partners:
MICPUN_66494
Bms1-type G domain-containing protein.
   
  0.453
MICPUN_81444
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.442
MICPUN_86102
Uncharacterized protein.
   
  0.431
MICPUN_92037
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
    
  0.426
MICPUN_61202
Uncharacterized protein.
   
  0.420
MICPUN_90125
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.419
MICPUN_95694
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.419
MICPUN_60565
Uncharacterized protein; Belongs to the NOB1 family.
   
 0.418
MICPUN_56017
Kh-domain-containing protein.
   
  0.417
MICPUN_95475
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
    
  0.417
Your Current Organism:
Micromonas commoda
NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.