Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MICPUN_51882 | MICPUN_59742 | C1FEP4 | C1E9J3 | AAA_23 domain-containing protein. | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.407 |
MICPUN_51882 | MICPUN_63369 | C1FEP4 | C1EFR0 | AAA_23 domain-containing protein. | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | 0.635 |
MICPUN_51882 | MICPUN_63986 | C1FEP4 | C1EGT4 | AAA_23 domain-containing protein. | Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family. | 0.712 |
MICPUN_51882 | MRE11 | C1FEP4 | C1ECB4 | AAA_23 domain-containing protein. | Mre11 DNA repair/recombination protein. | 0.758 |
MICPUN_57559 | MICPUN_59742 | C1E354 | C1E9J3 | Uncharacterized protein. | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.412 |
MICPUN_59742 | MICPUN_51882 | C1E9J3 | C1FEP4 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | AAA_23 domain-containing protein. | 0.407 |
MICPUN_59742 | MICPUN_57559 | C1E9J3 | C1E354 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | Uncharacterized protein. | 0.412 |
MICPUN_59742 | MICPUN_63369 | C1E9J3 | C1EFR0 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | 0.451 |
MICPUN_59742 | MICPUN_63986 | C1E9J3 | C1EGT4 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family. | 0.412 |
MICPUN_59742 | MICPUN_87151 | C1E9J3 | C1FJN8 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. In the C-terminal section; belongs to the HisA/HisF family. | 0.454 |
MICPUN_59742 | MRE11 | C1E9J3 | C1ECB4 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | Mre11 DNA repair/recombination protein. | 0.421 |
MICPUN_63369 | MICPUN_51882 | C1EFR0 | C1FEP4 | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | AAA_23 domain-containing protein. | 0.635 |
MICPUN_63369 | MICPUN_59742 | C1EFR0 | C1E9J3 | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.451 |
MICPUN_63369 | MICPUN_63986 | C1EFR0 | C1EGT4 | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family. | 0.716 |
MICPUN_63369 | MRE11 | C1EFR0 | C1ECB4 | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | Mre11 DNA repair/recombination protein. | 0.610 |
MICPUN_63986 | MICPUN_51882 | C1EGT4 | C1FEP4 | Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family. | AAA_23 domain-containing protein. | 0.712 |
MICPUN_63986 | MICPUN_59742 | C1EGT4 | C1E9J3 | Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family. | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.412 |
MICPUN_63986 | MICPUN_63369 | C1EGT4 | C1EFR0 | Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family. | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | 0.716 |
MICPUN_87151 | MICPUN_59742 | C1FJN8 | C1E9J3 | Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. In the C-terminal section; belongs to the HisA/HisF family. | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.454 |
MRE11 | MICPUN_51882 | C1ECB4 | C1FEP4 | Mre11 DNA repair/recombination protein. | AAA_23 domain-containing protein. | 0.758 |
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