STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICPUN_59996RanBD1 domain-containing protein. (244 aa)    
Predicted Functional Partners:
MICPUN_61047
Uncharacterized protein.
   
 0.998
MICPUN_82870
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.911
MICPUN_59845
Nucleoporin_N domain-containing protein.
   
 0.877
MICPUN_100470
Uncharacterized protein.
   
 0.864
MICPUN_102536
Uncharacterized protein.
   
 0.854
MICPUN_61855
Nup54 domain-containing protein.
   
 0.852
MICPUN_61691
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.844
MICPUN_55721
Uncharacterized protein.
   
 0.837
MICPUN_81846
Uncharacterized protein.
   
 0.833
MICPUN_107664
Uncharacterized protein.
   
 0.829
Your Current Organism:
Micromonas commoda
NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299
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