STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICPUN_91329PHB domain-containing protein. (292 aa)    
Predicted Functional Partners:
MICPUN_92406
Prohibitin.
   
 
 0.700
CL-PK2
Cyclic nucleotide dependent protein kinase II.
    
 
 0.659
MICPUN_113340
Uncharacterized protein.
      
 0.646
MICPUN_59768
AAA domain-containing protein.
   
 0.580
MICPUN_95367
AAA domain-containing protein.
   
 0.580
MICPUN_109406
Prohibitin.
   
 
 0.535
MICPUN_99023
AAA domain-containing protein.
   
 0.487
MICPUN_56879
50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
   
 0.487
MICPUN_59866
AAA domain-containing protein.
   
 0.487
MICPUN_59979
AAA domain-containing protein.
   
 0.487
Your Current Organism:
Micromonas commoda
NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.