STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICPUN_61281Uncharacterized protein. (958 aa)    
Predicted Functional Partners:
MICPUN_61047
Uncharacterized protein.
    
 0.612
MICPUN_113653
Cyclin B like protein.
   
 0.605
CYCD2
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.605
CYCB
Uncharacterized protein; Belongs to the cyclin family.
   
 0.605
MAD2
Mitotic spindle checkpoint protein.
   
 0.599
MICPUN_63353
Uncharacterized protein.
   
  0.599
MICPUN_85283
Serine/threonine-protein kinase.
   
 0.592
IFT140
Intraflagellar transport protein 140.
    
 0.583
MICPUN_80475
CPSF_A domain-containing protein.
   
 0.578
MICPUN_113393
Transcription initiation factor subunit A.
   
 0.573
Your Current Organism:
Micromonas commoda
NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.