STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRE11Mre11 DNA repair/recombination protein. (894 aa)    
Predicted Functional Partners:
Rad50
Rad50 DNA repair/recombination protein.
  
 0.999
MICPUN_56516
FHA domain-containing protein.
    
 0.994
MICPUN_75328
Uncharacterized protein.
  
 0.988
MICPUN_62284
DRBM domain-containing protein.
  
 0.988
MICPUN_97217
DNA_LIGASE_A3 domain-containing protein.
  
 0.977
MICPUN_69661
Uncharacterized protein.
   
 0.976
MICPUN_60892
SAP domain-containing protein.
   
 0.973
MICPUN_75688
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.969
MICPUN_60057
Ku domain-containing protein.
   
 0.966
MICPUN_62527
RING-type domain-containing protein.
   
 0.914
Your Current Organism:
Micromonas commoda
NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.