STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICPUN_76248Uncharacterized protein. (208 aa)    
Predicted Functional Partners:
MICPUN_63226
Uncharacterized protein; Belongs to the cytochrome P450 family.
     
 0.945
MICPUN_55325
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
      
 0.908
DXS
Transket_pyr domain-containing protein.
      
 0.876
SMT1
Methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.
      
 0.862
MICPUN_109549
GHMP_kinases_N domain-containing protein.
      
 0.846
MICPUN_58339
Oxidase.
      
 0.668
MICPUN_62297
3Beta_HSD domain-containing protein.
   
  
 0.659
MICPUN_57838
SAM dependent methyltransferase protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.
      
 0.656
MICPUN_98407
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
      
 0.656
FPS
Farnesyl-pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
      
 0.655
Your Current Organism:
Micromonas commoda
NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299
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