STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICPUN_72498ANK_REP_REGION domain-containing protein. (176 aa)    
Predicted Functional Partners:
MICPUN_51612
VWFA domain-containing protein.
   
 0.797
MICPUN_52590
Adhesion regulating molecule.
    
 0.787
MICPUN_107027
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.786
MICPUN_93957
Proteasomal ATPase; Belongs to the AAA ATPase family.
    
 0.782
MICPUN_106840
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.781
MICPUN_108299
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.780
MICPUN_108424
PCI domain-containing protein.
   
 0.780
MICPUN_87774
PCI domain-containing protein.
    
 0.779
MICPUN_60141
26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 0.778
MICPUN_51697
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.776
Your Current Organism:
Micromonas commoda
NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299
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