Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MICPUN_101095 | MICPUN_109168 | C1E8R4 | C1EEC8 | Uncharacterized protein. | Uncharacterized protein. | 0.474 |
MICPUN_101095 | MICPUN_56202 | C1E8R4 | C1E0F8 | Uncharacterized protein. | Dead box helicase. | 0.627 |
MICPUN_101095 | MICPUN_57351 | C1E8R4 | C1E2S6 | Uncharacterized protein. | Uncharacterized protein. | 0.474 |
MICPUN_101095 | MICPUN_57417 | C1E8R4 | C1E2Z2 | Uncharacterized protein. | Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. | 0.897 |
MICPUN_101095 | MICPUN_62757 | C1E8R4 | C1EEV5 | Uncharacterized protein. | Uncharacterized protein. | 0.529 |
MICPUN_101095 | MICPUN_98903 | C1E8R4 | C1DY38 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.519 |
MICPUN_108190 | MICPUN_62757 | C1E547 | C1EEV5 | Uncharacterized protein. | Uncharacterized protein. | 0.526 |
MICPUN_109168 | MICPUN_101095 | C1EEC8 | C1E8R4 | Uncharacterized protein. | Uncharacterized protein. | 0.474 |
MICPUN_109168 | MICPUN_114017 | C1EEC8 | C1FDG9 | Uncharacterized protein. | Centrosome protein SAS6. | 0.474 |
MICPUN_109168 | MICPUN_56202 | C1EEC8 | C1E0F8 | Uncharacterized protein. | Dead box helicase. | 0.882 |
MICPUN_109168 | MICPUN_57417 | C1EEC8 | C1E2Z2 | Uncharacterized protein. | Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. | 0.493 |
MICPUN_109168 | MICPUN_62757 | C1EEC8 | C1EEV5 | Uncharacterized protein. | Uncharacterized protein. | 0.542 |
MICPUN_109168 | MICPUN_87061 | C1EEC8 | C1FJ69 | Uncharacterized protein. | Mitochondrial carrier family; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.817 |
MICPUN_109168 | MICPUN_97460 | C1EEC8 | C1E7B9 | Uncharacterized protein. | Deoxyuridine 5'-triphosphate nucleotidohydrolase. | 0.817 |
MICPUN_114017 | MICPUN_109168 | C1FDG9 | C1EEC8 | Centrosome protein SAS6. | Uncharacterized protein. | 0.474 |
MICPUN_114017 | MICPUN_56202 | C1FDG9 | C1E0F8 | Centrosome protein SAS6. | Dead box helicase. | 0.627 |
MICPUN_114017 | MICPUN_57351 | C1FDG9 | C1E2S6 | Centrosome protein SAS6. | Uncharacterized protein. | 0.474 |
MICPUN_114017 | MICPUN_57417 | C1FDG9 | C1E2Z2 | Centrosome protein SAS6. | Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. | 0.897 |
MICPUN_114017 | MICPUN_62757 | C1FDG9 | C1EEV5 | Centrosome protein SAS6. | Uncharacterized protein. | 0.529 |
MICPUN_114017 | MICPUN_98903 | C1FDG9 | C1DY38 | Centrosome protein SAS6. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.519 |
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