STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICPUN_60607Uncharacterized protein. (523 aa)    
Predicted Functional Partners:
MICPUN_53147
Tryptophan synthase.
     
 0.665
MICPUN_78898
RPOLD domain-containing protein.
  
  
 0.582
RPB3
Dna-directed RNA polymerase II polypeptide a.
  
  
 0.582
MICPUN_80702
Uncharacterized protein.
   
 0.564
MICPUN_83242
Uncharacterized protein.
   
 0.564
CBF5
PUA domain-containing protein.
   
 0.564
MICPUN_56896
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.552
MICPUN_109019
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.552
MICPUN_58711
TWY3 methyltransferase.
   
  
 0.551
MICPUN_61798
Uncharacterized protein.
   
 
 0.532
Your Current Organism:
Micromonas commoda
NCBI taxonomy Id: 296587
Other names: CCMP2709, M. commoda, Micromonas commoda van Baren, Bachy & Worden, 2016, Micromonas pusilla NOUM17, Micromonas pusilla RCC299, Micromonas sp. CCMP1195, Micromonas sp. CCMP1764, Micromonas sp. CCMP492, Micromonas sp. NEPCC29, Micromonas sp. RCC 299, Micromonas sp. RCC299, Micromonas sp. RCC372, Micromonas sp. RCC447, Micromonas sp. RCC448, Micromonas sp. RCC449, Micromonas sp. RCC450, Micromonas sp. RCC472, Micromonas sp. RCC570, Micromonas sp. RCC676, Micromonas sp. RCC803, Micromonas sp. RCC804, Micromonas sp. RCC805, Micromonas sp. RCC808, Micromonas sp. RCC836, RCC299
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.