STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_0090TRAP dicarboxylate transporter- DctM subunit. (446 aa)    
Predicted Functional Partners:
Bpro_0088
TRAP dicarboxylate transporter, DctP subunit.
 
  0.992
Bpro_0089
Tripartite ATP-independent periplasmic transporter, DctQ component.
 
 
 0.895
Bpro_1455
TRAP dicarboxylate transporter, DctP subunit.
    0.788
Bpro_1871
TRAP dicarboxylate transporter, DctP subunit.
    0.787
Bpro_2838
TRAP dicarboxylate transporter, DctP subunit.
    0.787
Bpro_0553
TRAP dicarboxylate transporter, DctP subunit.
    0.786
Bpro_1290
TRAP dicarboxylate transporter, DctP subunit.
    0.786
Bpro_2841
TRAP dicarboxylate transporter, DctP subunit.
    0.786
Bpro_2963
TRAP dicarboxylate transporter, DctP subunit.
    0.786
Bpro_4882
TRAP dicarboxylate transporter, DctP subunit.
    0.786
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.