STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_0105Alcohol dehydrogenase, zinc-binding protein. (328 aa)    
Predicted Functional Partners:
Bpro_3016
3-hydroxyacyl-CoA dehydrogenase.
  
 0.918
Bpro_2477
acyl-CoA dehydrogenase-like protein.
 
0.912
Bpro_4547
Methylmalonate-semialdehyde dehydrogenase (acylating).
   
 0.911
Bpro_1633
Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.909
Bpro_0275
Branched-chain alpha-keto acid dehydrogenase E2 component.
   
 0.908
Bpro_1122
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.907
Bpro_2093
Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.907
Bpro_2164
propionyl-CoA carboxylase carboxyltransferase subunit.
  
 
 0.905
Bpro_0761
AMP-dependent synthetase and ligase.
   
 
 0.904
Bpro_1590
AMP-dependent synthetase and ligase.
   
 
 0.904
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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