STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_0704Carbohydrate ABC transporter ATP-binding protein, CUT1 family; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily. (336 aa)    
Predicted Functional Partners:
Bpro_0700
Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-.
 
 
 0.966
Bpro_0701
Carbohydrate ABC transporter membrane protein 2, CUT1 family; TC 3.A.1.1.-.
 
 0.964
Bpro_0699
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; TC 3.A.1.1.-.
 
 
 0.886
Bpro_3817
Carbohydrate ABC transporter membrane protein 2, CUT1 family; TC 3.A.1.1.-.
 
 
 0.853
Bpro_3816
Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-.
 
 
 0.852
Bpro_3527
Carbohydrate ABC transporter membrane protein 2, CUT1 family; TC 3.A.1.1.-.
 
 
 0.834
Bpro_3528
Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-.
 
 
 0.833
Bpro_1259
Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-.
 
 
 0.815
Bpro_1260
Carbohydrate ABC transporter membrane protein 2, CUT1 family; TC 3.A.1.1.-.
 
 0.813
Bpro_0703
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.
 
    
0.801
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.