STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_0892Protein of unknown function DUF883, ElaB. (114 aa)    
Predicted Functional Partners:
Bpro_0893
Membrane protein-like protein.
 
  
 0.972
Bpro_2157
Putative serine protein kinase, PrkA.
   
    0.779
Bpro_0894
Conserved hypothetical protein.
       0.623
Bpro_0175
17 kDa surface antigen.
  
  
 0.563
Bpro_1514
Conserved hypothetical protein.
  
     0.537
Bpro_1744
Rieske (2Fe-2S) region.
  
     0.498
Bpro_3462
17 kDa surface antigen.
  
  
 0.484
Bpro_2159
SpoVR.
   
    0.477
Bpro_2493
High-affinity nickel-transporter; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
     0.453
Bpro_3601
Succinate dehydrogenase subunit D.
  
     0.452
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.