STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_1000Two component transcriptional regulator, LuxR family. (177 aa)    
Predicted Functional Partners:
Bpro_4297
PAS/PAC sensor signal transduction histidine kinase.
 
 
 0.835
Bpro_0766
Histidine kinase.
 
 
 0.832
Bpro_0294
PAS/PAC sensor signal transduction histidine kinase.
 
 
 0.831
Bpro_0880
Multi-sensor signal transduction histidine kinase.
 
 
 0.829
Bpro_2542
Periplasmic sensor signal transduction histidine kinase.
 
 
 0.824
Bpro_2468
PAS/PAC sensor hybrid histidine kinase.
  
 
 0.817
Bpro_0708
Periplasmic sensor signal transduction histidine kinase.
 
 
 0.816
Bpro_2432
Two component transcriptional regulator, LuxR family.
  
     0.774
Bpro_1169
Response regulator receiver domain protein (CheY-like).
  
     0.753
Bpro_0302
Transcriptional regulator, LuxR family.
  
     0.745
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.