STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_1030Transcriptional regulator, GntR family. (237 aa)    
Predicted Functional Partners:
Bpro_0695
Transcriptional regulator, GntR family.
  
     0.774
Bpro_0549
Transcriptional regulator, GntR family.
  
     0.768
Bpro_2210
Transcriptional regulator, GntR family.
  
     0.766
Bpro_1052
Transcriptional regulator, GntR family.
  
     0.765
Bpro_0095
Transcriptional regulator, GntR family.
  
  
 0.750
Bpro_3977
Transcriptional regulator, GntR family.
  
  
 0.741
Bpro_1029
2,3-dimethylmalate lyase.
  
  
 0.736
Bpro_1028
Histidine triad (HIT) protein.
  
    0.712
Bpro_1284
Transcriptional regulator, GntR family.
  
  
 0.521
Bpro_1031
Putative transmembrane protein.
       0.513
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.