STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_1630benzoyl-CoA oxygenase, component A. (426 aa)    
Predicted Functional Partners:
Bpro_1629
benzoyl-CoA oxygenase, component B.
 
  
 0.994
Bpro_1628
2,3-dihydro-2,3-dihydroxybenzoyl-CoA ring cleavage enzyme.
 
 
 0.991
Bpro_2339
Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein.
  
 
 0.877
Bpro_2804
NAD-dependent formate dehydrogenase flavoprotein subunit.
   
 
 0.871
aroK-2
Transcriptional regulator, XRE family with shikimate kinase activity; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
   
 0.867
Bpro_2805
NAD-dependent formate dehydrogenase iron-sulfur protein / NAD-dependent formate dehydrogenase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.867
Bpro_2335
Sulfate adenylyltransferase subunit 1.
  
  
 0.825
Bpro_1626
Conserved hypothetical protein.
 
     0.823
Bpro_0639
Precorrin 3B synthase CobZ.
 
 
 0.815
cysA
Sulphate transport system permease protein 1; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
  
  
 0.815
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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