STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_1684Auxin Efflux Carrier. (329 aa)    
Predicted Functional Partners:
Bpro_1685
Protein of unknown function DUF486.
  
    0.694
Bpro_1683
TonB-dependent receptor.
       0.627
Bpro_1421
Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+)., Phosphate acetyltransferase.
  
  
 0.527
Bpro_4858
Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+)., Phosphate acetyltransferase.
  
  
 0.527
Bpro_3076
Major facilitator superfamily MFS_1.
  
    0.464
Bpro_1682
Hypothetical protein.
       0.431
Bpro_1686
Protein of unknown function DUF47.
       0.421
Bpro_1681
Hypothetical protein.
       0.413
Bpro_1687
Phosphate transporter.
       0.406
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.