STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_19084,5-dihydroxyphthalate dehydrogenase. (399 aa)    
Predicted Functional Partners:
Bpro_1909
Phthalate 4,5-dioxygenase, reductase subunit.
 
  
  0.980
Bpro_1910
Phthalate 4,5-dioxygenase, oxygenase subunit.
 
  
  0.979
Bpro_1912
4,5-dihydroxyphthalate decarboxylase.
 
  
 0.965
Bpro_1907
Transcriptional regulator, MarR family.
       0.773
Bpro_4496
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.613
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.580
Bpro_1854
Xylose isomerase-like TIM barrel.
 
  
 0.543
Bpro_1913
Protein of unknown function DUF6, transmembrane.
 
     0.520
Bpro_4011
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.514
Bpro_1458
Xylose isomerase-like TIM barrel.
  
  
 0.477
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.