STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_195417 kDa surface antigen. (206 aa)    
Predicted Functional Partners:
Bpro_1957
Periplasmic sensor signal transduction histidine kinase.
 
     0.855
Bpro_1955
Propeptide, PepSY amd peptidase M4.
       0.782
Bpro_1956
Two component transcriptional regulator, winged helix family.
 
     0.727
Bpro_3177
17 kDa surface antigen.
 
     0.468
Bpro_0175
17 kDa surface antigen.
  
     0.442
Bpro_3642
Anti sigma-E protein, RseA.
   
    0.420
Bpro_0909
Helix-turn-helix protein, CopG.
  
     0.408
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.