STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
palOmpA/MotB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (180 aa)    
Predicted Functional Partners:
tolB
TolB-like protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.967
cpoB
Tetratricopeptide TPR_2; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
 
  
 0.924
tolQ
Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
   
 0.873
Bpro_2891
Cell division and transport-associated protein TolR; TC 2.C.1.2.1.
 
 
 
 0.870
bamA
Surface antigen (D15); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.772
Bpro_1014
Lipoprotein releasing system, transmembrane protein, LolC/E family.
  
 
 
 0.759
Bpro_4607
MotA/TolQ/ExbB proton channel.
 
   
 0.741
Bpro_3053
Outer membrane transport energization protein ExbD; TC 2.C.1.1.1.
 
 
 
 0.707
Bpro_4606
Biopolymer transport protein ExbD/TolR.
 
 
 
 0.700
Bpro_1988
UBA/THIF-type NAD/FAD binding fold protein.
       0.667
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.